› 7q36

X-ray diffraction
2.6Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-126093 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Sodium pumping rhodopsin Chain: A
Molecule details ›
Chain: A
Length: 280 amino acids
Theoretical weight: 31.54 KDa
Source organism: Dokdonia eikasta
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: N0DKS8 (Residues: 1-280; Coverage: 100%)
Gene name: NaR
Sequence domains: Bacteriorhodopsin-like protein

Ligands and Environments

5 bound ligands:
Ligand LFA 23 x LFA
Ligand HEX 5 x HEX
Ligand NA 1 x NA
Ligand KR 11 x KR
Ligand RET 1 x RET
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID23-1
Spacegroup: I222
Unit cell:
a: 40.489Å b: 82.18Å c: 233.442Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.219 0.216 0.269
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

143 mentions without citation

The SET-domain protein superfamily: protein lysine methyltransferases.
Dillon et al. (2005)
142 more