7shl

Electron Microscopy
3.5Å resolution

Structure of Xenopus laevis CRL2Lrr1 (State 2)

Released:
Source organism: Xenopus laevis
Related structures: EMD-25128

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
PDBe Complex ID:
PDB-CPX-103605 (preferred)
Entry contents:
5 distinct polypeptide molecules
Macromolecules (5 distinct):
Cullin family profile domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 745 amino acids
Theoretical weight: 87.24 KDa
Source organism: Xenopus laevis
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q6PCF2 (Residues: 1-745; Coverage: 100%)
Gene names: cul2, cul2.L
Sequence domains:
Ubiquitin-like domain-containing protein Chain: B
Molecule details ›
Chain: B
Length: 119 amino acids
Theoretical weight: 13.33 KDa
Source organism: Xenopus laevis
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q6PHL7 (Residues: 1-119; Coverage: 100%)
Gene names: elob, elob.L, elongin-B, elonginb, siii, tceb2, tceb2.L
Sequence domains: Ubiquitin family
Elongin-C Chain: C
Molecule details ›
Chain: C
Length: 112 amino acids
Theoretical weight: 12.49 KDa
Source organism: Xenopus laevis
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q6PHW7 (Residues: 1-112; Coverage: 100%)
Gene names: LOC108695349, LOC108719192, eloc, eloc.L, eloc.S, tceb1, tceb1.L
Sequence domains: Skp1 family, tetramerisation domain
MGC82386 protein Chain: L
Molecule details ›
Chain: L
Length: 418 amino acids
Theoretical weight: 46.88 KDa
Source organism: Xenopus laevis
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: A4QNS4 (Residues: 1-418; Coverage: 100%)
Gene names: 4-1bblrr, MGC82386, lrr-1, lrr1, lrr1.L, ppil5
Sequence domains: Leucine rich repeat
E3 ubiquitin-protein ligase RBX1 Chain: R
Molecule details ›
Chain: R
Length: 108 amino acids
Theoretical weight: 12.28 KDa
Source organism: Xenopus laevis
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: A0A1L8GNJ6 (Residues: 23-128; Coverage: 82%)
Gene name: rbx1.L
Sequence domains: RING-H2 zinc finger domain

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.5Å
Relevant EMDB volumes: EMD-25128
Expression system: Spodoptera frugiperda