7stx

Electron Microscopy
3.14Å resolution

Cryo-EM structure of human NatB in complex with CoA-Alpha-Synuclein

Released:
Source organism: Homo sapiens
Related structures: EMD-25438

Function and Biology Details

Reaction catalysed:
Acetyl-CoA + an N-terminal L-methionyl-L-asparaginyl-[protein] = an N-terminal N(alpha)-acetyl-L-methionyl-L-asparginyl-[protein] + CoA
Biochemical function:
Cellular component:

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-153497 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
N-alpha-acetyltransferase 20 Chain: A
Molecule details ›
Chain: A
Length: 178 amino acids
Theoretical weight: 20.39 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: P61599 (Residues: 1-178; Coverage: 100%)
Gene names: NAA20, NAT5
Sequence domains: Acetyltransferase (GNAT) family
N-alpha-acetyltransferase 25, NatB auxiliary subunit Chain: B
Molecule details ›
Chain: B
Length: 956 amino acids
Theoretical weight: 109.64 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q14CX7 (Residues: 45-972; Coverage: 96%)
Gene names: C12orf30, MDM20, NAA25, NAP1
Sequence domains: N-acetyltransferase B complex (NatB) non catalytic subunit
Alpha-synuclein Chain: C
Molecule details ›
Chain: C
Length: 5 amino acids
Theoretical weight: 642 Da
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P37840 (Residues: 1-5; Coverage: 4%)
Gene names: NACP, PARK1, SNCA

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.14Å
Relevant EMDB volumes: EMD-25438
Expression systems:
  • Spodoptera frugiperda
  • Escherichia coli