› 7wam

X-ray diffraction
1.49Å resolution

Crystal structure of HaloTag complexed with VL1

Released:
DOI: 10.2210/pdb7wam/pdb
PDB entry 7wam coloured by chain, front view.
PDB entry 7wam coloured by chain, side view.
PDB entry 7wam coloured by chain, top view.
Source organism: Rhodococcus sp.
Primary publication:
A chemical tool for blue light-inducible proximity photo-crosslinking in live cells.
Mishra PK, Kang MG, Lee H, Kim S, Choi S, Sharma N, Park CM, Ko J, Lee C, Seo JK, Rhee HW
Chem Sci 13 955-966 (2022)
PMID: 35211260

Function and Biology Details

Reaction catalysed: 
1-haloalkane + H(2)O = a primary alcohol + halide
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-141210 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Haloalkane dehalogenase Chain: A
Molecule details ›
Chain: A
Length: 299 amino acids
Theoretical weight: 33.72 KDa
Source organism: Rhodococcus sp.
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P0A3G3 (Residues: 2-293; Coverage: 100%)
Gene name: dhaA
Sequence domains: alpha/beta hydrolase fold

Ligands and Environments

2 bound ligands:
Ligand 8MH 1 x 8MH
Ligand CL 1 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PAL/PLS BEAMLINE 7A (6B, 6C1)
Spacegroup: P43212
Unit cell:
a: 63.078Å b: 63.078Å c: 164.112Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.15 0.149 0.188
Expression system: Escherichia coli BL21(DE3)

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Citations

1 review citation

Finding a vocation for validation: taking proteomics beyond association and location.
Long et al. (2023)
2 other articles

1 mention without citation

A chemical tool for blue light-inducible proximity photo-crosslinking in live cells.
Mishra et al. (2022)