› 7x0d

X-ray diffraction
2.4Å resolution

Crystal structure of phospholipase A1, CaPLA1

Released:
DOI: 10.2210/pdb7x0d/pdb
PDB entry 7x0d coloured by chain, front view.
PDB entry 7x0d coloured by chain, side view.
PDB entry 7x0d coloured by chain, top view.
Source organism: Capsicum annuum
Primary publication:
Crystal Structures of the Plant Phospholipase A1 Proteins Reveal a Unique Dimerization Domain.
Heo Y, Lee I, Moon S, Yun JH, Kim EY, Park SY, Park JH, Kim WT, Lee W
Molecules 27 (2022)
PMID: 35408716

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107797 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Phospholipase A1 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 398 amino acids
Theoretical weight: 45.27 KDa
Source organism: Capsicum annuum
Expression system: Escherichia coli
UniProt:
  • Canonical: A5YW95 (Residues: 1-397; Coverage: 100%)
Gene names: PLA1, T459_03599
Sequence domains: Lipase (class 3)

Ligands and Environments

1 bound ligand:
Ligand SO4 4 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE BL-17A
Spacegroup: P21
Unit cell:
a: 102.313Å b: 59.568Å c: 147.319Å
α: 90° β: 90.139° γ: 90°
R-values:
R R work R free
0.209 0.206 0.26
Expression system: Escherichia coli

Quick links

Citations

1 mention without citation

Crystal Structures of the Plant Phospholipase A1 Proteins Reveal a Unique Dimerization Domain.
Heo et al. (2022)