› 7yrn

Electron Microscopy
2.99Å resolution

Cyro-EM structure of HCMV glycoprotein B in complex with 1B03 Fab

Released:
DOI: 10.2210/pdb7yrn/pdb
PDB entry 7yrn coloured by chain, front view.
PDB entry 7yrn coloured by chain, side view.
PDB entry 7yrn coloured by chain, top view.
Source organisms:
Entry authors: Wang H, Zhu S, Liao H
Related structures: EMD-34063

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero nonamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-226635 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (4 distinct):
Envelope glycoprotein B Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 731 amino acids
Theoretical weight: 83.55 KDa
Source organism: Human betaherpesvirus 5
Expression system: Homo sapiens
UniProt:
  • Canonical: B9VXM4 (Residues: 1-699; Coverage: 77%)
Gene name: UL55
Sequence domains:
1B03 Fab antibody Heavy Chain Chains: D, F, H
Molecule details ›
Chains: D, F, H
Length: 223 amino acids
Theoretical weight: 23.85 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
1B03 Fab antibody Light Chain Chains: E, G, I

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer
1 bound ligand:
Ligand NAG 6 x NAG
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this EM entry.
Resolution: 2.99Å
Relevant EMDB volumes: EMD-34063
Expression system: Homo sapiens

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