› 8evl

X-ray diffraction
1.9Å resolution

Crystal structure of alpha-COPI N-terminal WD40 domain

Released:
DOI: 10.2210/pdb8evl/pdb
Model geometry
Fit model/data
PDB entry 8evl coloured by chain, front view.
PDB entry 8evl coloured by chain, side view.
PDB entry 8evl coloured by chain, top view.
Source organism: Schizosaccharomyces pombe
Primary publication:
Strategies for rapid production of crystallization quality coatomer WD40 domains.
Dey D, Hasan SS
Protein Expr Purif 212 106358 (2023)
PMID: 37625737

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-188777 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative coatomer subunit alpha Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 328 amino acids
Theoretical weight: 37.76 KDa
Source organism: Schizosaccharomyces pombe
Expression system: Escherichia coli
UniProt:
  • Canonical: Q96WV5 (Residues: 1-327; Coverage: 27%)
Gene name: SPBPJ4664.04
Sequence domains: WD domain, G-beta repeat

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: NSLS-II BEAMLINE 17-ID-1
Spacegroup: P21
Unit cell:
a: 36.687Å b: 171.416Å c: 69.991Å
α: 90° β: 97.34° γ: 90°
R-values:
R R work R free
0.194 0.192 0.233
Expression system: Escherichia coli

Quick links

Citations

1 citations in other articles

A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs.
Dey et al. (2023)