› 8f5m

X-ray diffraction
2.4Å resolution

Crystal structure of P74 gp62

Released:
DOI: 10.2210/pdb8f5m/pdb
Model geometry
Fit model/data
PDB entry 8f5m coloured by chain, front view.
PDB entry 8f5m coloured by chain, side view.
PDB entry 8f5m coloured by chain, top view.
Source organism: Thermus virus P74-26
Primary publication:
Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
Chaban A, Minakhin L, Goldobina E, Bae B, Hao Y, Borukhov S, Putzeys L, Boon M, Kabinger F, Lavigne R, Makarova KS, Koonin EV, Nair SK, Tagami S, Severinov K, Sokolova ML
OpenAccess logo Nat Commun 15 317 (2024)
PMID: 38182597

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-269888 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Envelope glycoprotein gp62 Chains: A, B
Molecule details ›
Chains: A, B
Length: 617 amino acids
Theoretical weight: 68.64 KDa
Source organism: Thermus virus P74-26
Expression system: Escherichia coli
UniProt:
  • Canonical: A7XXN5 (Residues: 27-643; Coverage: 96%)
Gene name: P74p62

Ligands and Environments

1 bound ligand:
Ligand MG 2 x MG
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: APS BEAMLINE 21-ID-G
Spacegroup: C2221
Unit cell:
a: 110.937Å b: 210.102Å c: 181.089Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.188 0.186 0.231
Expression system: Escherichia coli

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