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› 8ghx

X-ray diffraction
2.46Å resolution

Crystal Structure of CelD Cellulase from the Anaerobic Fungus Piromyces finnis

Released:
DOI: 10.2210/pdb8ghx/pdb
Model geometry
Fit model/data
PDB entry 8ghx coloured by chain, front view.
PDB entry 8ghx coloured by chain, side view.
PDB entry 8ghx coloured by chain, top view.
Source organism: Piromyces finnis
Primary publication:
Structure and enzymatic characterization of CelD endoglucanase from the anaerobic fungus Piromyces finnis.
Dementiev A, Lillington SP, Jin S, Kim Y, Jedrzejczak R, Michalska K, Joachimiak A, O'Malley MA
OpenAccess logo Appl Microbiol Biotechnol (2023)
PMID: 37548665

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-269002 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
CBM10 domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 365 amino acids
Theoretical weight: 41.76 KDa
Source organism: Piromyces finnis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A1Y1V643 (Residues: 747-1108; Coverage: 30%)
Gene name: BCR36DRAFT_398243
Sequence domains: Cellulase (glycosyl hydrolase family 5)

Ligands and Environments

1 bound ligand:
Ligand EDO 10 x EDO
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P212121
Unit cell:
a: 69.726Å b: 81.85Å c: 133.259Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.19 0.188 0.23
Expression system: Escherichia coli BL21(DE3)

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Citations

1 mention without citation

Structure and enzymatic characterization of CelD endoglucanase from the anaerobic fungus Piromyces finnis.
Dementiev et al. (2023)