8hr2

X-ray diffraction
1.94Å resolution

Ternary Crystal Complex Structure of RBD with NB1B5 and NB1C6

Released:
Model geometry
Fit model/data

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-272930 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Spike protein S1 Chain: A
Molecule details ›
Chain: A
Length: 219 amino acids
Theoretical weight: 24.65 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 333-523; Coverage: 15%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding
NB1C6 Chain: B
Molecule details ›
Chain: B
Length: 128 amino acids
Theoretical weight: 13.99 KDa
Source organism: Vicugna pacos
Expression system: Escherichia coli
NB1B5 Chain: C

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: SSRF BEAMLINE BL19U1
Spacegroup: P3121
Unit cell:
a: 89.522Å b: 89.522Å c: 125.821Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.192 0.191 0.222
Expression systems:
  • Homo sapiens
  • Escherichia coli